Abstracts for the Fifth Discussions in Structural Molecular Biology

 

V. Baumruk
Methods of optical spectroscopy for structural biology

 

K. Bezouška
SPECTROSCOPY, MASS SPECTROMETRY AND NMR ARE ESSENTIAL TOOLS IN THE PRODUCTION OF SOLUBLE RECEPTORS OF NATURAL KILLER CELLS

 

J. Brynda
From nonpeptide toward noncarbon protease inhibitors: Metallacarboranes as specific and potent inhibitors of HIV protease

 

J. Dohnálek
Structure elucidation by diffraction methods – contribution to structural biology

 

R. Ettrich
Molecular systems biology: Molecular simulations of proteins and their complexes

 

P. Flecker
Molecular Modelling studies with Bowman Birk inhibitors

 

P. Florek
Bacterial programmed cell death – genetical, biochemical, and structural insight

 

J. Florián
DNA Replication Fidelity: Theory and Experiment

 

M. Haeubl
Expression and Purification of apo-Micro-Myoglobin and its Reconstitution to the Heme binding Micro-Myoglobin

 

K. Hofbauerová
Human protein CD69 studied by combination of vibrational spectroscopy and molecular

 

M. Hušák
The use of GPU based calculations in structural biology

 

R. Chaloupková
PHYSICAL VARIABLES AS A CONTROL OF ENZYME STEREOselectivity

 

E. Chovancová
EVOLUTION OF HALOALKANE DEHALOGENASE PROTEIN FAMILY

 

T. Chrobáková
Engineering of enantioselective haloalkane dehalogenase by cumulative mutagenesis

 

P. Jeřábek
Computer-Assisted Design of Fluorescent Probes for Solvent Relaxation Experiments

 

A. Jesenská

Mycobacteria as a source of haloalkane dehalogenases: Identification of the catalytic pantad within the structure of DhmA from Mycobacterium avium N85

M. Klvaňa
Modelling of product release and identification of export routes in haloalkane dehalogenase DhaA

V. Kopecký
Behavior of the human
a1-acid glycoprotein in water–low aliphatic alcohol systems

V. Krejčiříková
STRUCTURAL STUDIES OF GALECTIN-4 N-TERMINAL DOMAIN IN COMPLEX WITH LACTOSE

I. Kutá Smatanová
Crystals of photosystem II core complex from Pisum sativum

M. Kutý
Photosynthetic reaction centre and chlorosomal pigments, a computational study

M. Lapkouski
Overexpression, purification and crystallization attempts of the recombinant R subunit EcoAI

M. Lexa
A correlation-based approach for predicting protein domains from sequence

P. Macek
Molecular dynamics study of major urinary protein-pheromone interactions: A structural model for ligand-induced flexibility increase

P. Mader
Stabilization of antibody structure upon binding epitope peptide: x-ray, microcalorimetry and molecular dynamics study

L. Maršálková
Temperature dependence of human a1-acid glycoprotein behavior induced by mixed solvents and acid pH

V. Martínek
Theoretical investigation of the effects of mutations of the charged amino acids on the dissociation and rate constants for the DNA replication by human DNA polymerase b

M. Monincová
HIGH-THROUGHPUT CHARACTERIZATION OF ENZYMES FROM GENOMIC AND PROTEOMIC PROJECTS: – MULTIVARIATE STATISTICAL APPROACH

T. Mozga
Structure-enantioselectivity relationships of haloalkane dehalogenases

V. Mráziková
Structural study on C-terminus of the vanilloid receptor TRPV1

M. Nálezková
NMR study of protein CD69

M. Navrátil
Preparation of antennary oligosaccharide ligands from ovomucoid and their binding to CD69 receptor

 

P. Novák
PAIN: Program for Analysis of Internal motion. An Application to MD Simulated Motions of Major Urinary Protein-I

 

T. Obšil
REGULATION BY MOLECULAR INTERFERENCE: HOW 14-3-3 PROTEIN CONTROLS ACTIVITY OF FORKHEAD TRANSCRIPTION FACTOR FOXO4

 

V. Obšilová
14-3-3 PROTEIN CHANGES CONFORMATION OF NUCLEAR LOCALIZATION SEQUENCE  OF FORKHEAD TRANSCRIPTION FACTOR FOXO4

 

P. Palenčár
Crystal structure of photosystem II from Thermosynechococcus elongatus refined and studied by molecular dynamics

 

P. Pavelčíková
SpoIIS components of Bacillus subtilis programmed cell death

 

A. Pavelková
Structural study of Thermoplasma acidophilum protein TA1019 by NMR spectroscopy

 

N. Pavlendová
CHARACTERIZATION AND CRYSTALLIZATION OF PROTEINS INVOLVED IN CONTROL OF CELL DIVISION AND CHROMOSOME SEGREGATION IN Bacillus subtilis

 

J. Přecechtělová
MD/DFT STUDY OF  ENVIRONMENTAL EFFECTS ON 31P CHEMICAL SHIFT TENSORS IN B-DNA

 

Z. Prokop

DISCOVERY OF STEREOSELECTIVE HALOALKANE DEHALOGENASE: NEW TOOL FOR ASYMMETRIC SYNTHESIS

A. Samad
Structural study on the N-terminus of the vanilloid receptor TRPV1

A. Samad
Optimization of Protocol for Identifying Novel Genes for Structural Study

V. Sklenář
BioNMR: Contemporary Trends, Challenges, and Future Prospects

Ž. Sovová
Structure and Dynamics of the N-terminal Loop Region of PsbQ from Photosystem II of Spinacia oleracea studied by the Means of Molecular Modeling and Vibrational Spectroscopy

D. Svozil
DNA Conformational Classes

V. Sychrovský
CORRECTION TO NMR PARAMETERS VIA AVERAGING OVER THE MOLECULAR MOTION

J. Šebek
MD and Ab Initio Modeling of Electronic Spectra of N-methylacetamide and Peptides in Water Solutions

L. Šimunová
NUCLEOTIDE BINDING INDUCES CONFORMATIONAL CHANGES APPARENT ON THE NA+/K+-ATPASE LARGE CYTOPLASMIC LOOP

J. Šponer
Structure and dynamics of RNA and DNA. Advanced computational studies

D. Štys
Molecular basis of a lipid-PsbH protein interaction: a structural and “ab-initio” computational study

K. Šurdová
PROTEIN-PROTEIN INTERACTIONS DURING EARLY SPORULATION EVENTS IN BACILLUS SUBTILIS

I. Tomčová
Structural study on crystal of heme binding protein from photosynthetic anaerobic bacterium Thiocapsa roseopersicina

L. Trantírek
Structural non-rigidity of hetero-aromatic bases in nucleic acids

S. Trantírková
In-cell NMR in Leishmania tarentolae

B. Uhnáková
Purification and preparation of antibody scFv TU20 p 643 and p 745 for crystallization and determination structure by x-ray

O. Vaněk
STRUCTURAL STUDIES OF LIGAND BINDING OF NATURAL KILLER CELL RECEPTOR, PROTEIN CD69

J. Vlach
A single-point mutation of M-PMV matrix protein causes reorientation of protein domains and changes the phenotype of the virus

Z. Vokáčová
NMR parameters in RNA molecules and their correlation with molecular structure

J. Wolfová
Combination of X-ray diffraction analysis and limited proteolysis used in structural study of flavoprotein WrbA