X-ray structure of PDZ domain of Dishevelled-3 protein

J. Komárek1, J. Kumar2, L. Motlová1, V. Bryja3, K. Tripsianes2, C. Bařinka1

1Institute of Biotechnology, Czech Academy of Sciences, Průmyslová 595, 252 50 Vestec

2Central European Institute of Technology (CEITEC), Kamenice 753/5, 625 00 Brno

3Department of Experimental Biology, Faculty of Science, Masaryk University, Kotlářská 267/2, 611 37 Brno

jan.komarek@ibt.cas.cz

Dishevelled (DVL) is a key component of the Wnt signalling pathway, which governs a wide range of biological processes (cell proliferation, migration and differentiation, stem cell renewal, cell polarity). It is involved in both canonical (β-catenin-dependent) and non-canonical (β-catenin-independent) cell signalling pathways [1]. Dishevelled protein was first discovered in Drosophila mutants with disordered hair and bristle polarity [2], and it was proved that it plays an important role in embryogenesis. Dishevelled proteins are also connected with the process of cancerogenesis in humans, and mutations/dysregulation of Wnt pathway components are associated with certain carcinomas [3].

Dishevelled proteins consist of three conserved domains: N-terminal DIX domain, central PDZ domain, and C-terminal DEP domain, that are linked by an unstructured basic region (DIX-PDZ) and proline-rich region (PDZ-DEP) [4]. As a scaffolding protein, DVL uses its domains for interaction with a wide range of human proteins [1]. Its activity is affected by post-translational modifications (phosphorylation, ubiquitination and acetylation) [3, 5], however, the exact way how Dishevelled proteins integrate and relay the complex signals to perform such a broad spectrum of biological activities remains unknown.

This work is focused on the crystallization and structure determination of the PDZ domain of human Dishevelled-3 (DVL3) protein. A 1.4 Å diffraction data were collected and the structure of PDZ was solved by the molecular replacement method.

 

1. C. Gao, Y. G. Chen, Cell Signal 22(5) (2009), 717-27.

2. O. G. Fahmy, M. J. Fahmy, Genetics 44(6) (1959), 1149-71.

3. M. Sharma, I. Castro-Piedras, G. E. Simmons, K. Pruitt, Cell Signal 47 (2018), 52-64.

4. M. Boutros, M. Mlodzik. Mech Dev 83(1-2) (1999), 27-37.

5. M. Sharma, D. Molehin, I. Castro-Piedras, E. G. Martinez, K. Pruitt. Sci Rep 9(1) (2019) 16257

 

We acknowledge CMS-Biocev ("Biophysical techniques, Crystallization, Diffraction, Structural mass spectrometry”) supported by MEYS CR (LM2018127).