Crystal structure determination of rosasite and mcguinnessite
N. Perchiazzi
Department of Earth Sciences, Università di
Pisa
Via S.Maria 53, 56126 Pisa Italy
The carbonate group of malachite, with general formula Me2+2
(CO3)(OH)2, includes malachite (Me2+= Cu),
georgeite (Cu), glaukosphaerite (Cu,Zn), kolwezite (Cu,Co), mcguinnessite
(Cu,Mg), nullaginite (Ni), pokrovskite (Mg), rosasite (Cu,Zn). Besides the chemical composition,
the structural relationships between these minerals are demonstrated by the similarity
of their powder patterns. A constant feature of these minerals is their
microcrystalline fibrous habit. This feature precluded in most cases single
crystal studies, which could be performed for malachite and rosasite only. For
the remaining phases, space group symmetry and cell parameters were mainly
derived from powder pattern indexing. Apart from that of malachite (Zigan et
al., 1977), no other structural determinations are available for the minerals
of the malachite group.
Spheroidal aggregates of rosasite in
extremely thin fibrous crystals from Ojuela mine, Durango, Mexico, were carefully hand picked under the
binocular microscope and gently hand milled in an agate mortar under acetone,
to fill with the resulting powder a 0.5 mm Lindemann capillary.
Powder
diffraction data were collected on a Bruker D8 Vario diffractometer, equipped
with a primary Ge (111) monochromator and a Braun PSD detector, working in
capillary geometry. This configuration
allowed us to use a carefully selected amount of material, as well as to reduce
the strong preferred orientation due to the fibrous habit of rosasite. Two
scans were acquired in the interval 11-60 and 60-100 2θ°, with step
0.016°and counting times 24 and 48 s respectively.
The crystal structure of rosasite was solved through the EXPO (Altomare et al., 1999) program. A trial with a malachite-like starting model gave no results, whereas assuming the space group and the cell constants gave in the single crystal study by Roberts et al. (1986), we obtained a promising starting structural model. This model was completed through the subsequent Rietveld refinement, performed through the GSAS/EXPGUI suite of programs (Larson and von Dreele, 2000; Toby, 2001). The refined cell parameters were a=12.8976(3), b=9.3705(1), c=3.1622(1) Å, β=110.260(3)°, space group P21/a.
In the early stages of the refinement, constraints on the Me-O bonds were introduced and finally removed. The carbonate group was refined as a rigid body, imposing a C-O distance of 1.3 Å and a common isotropic displacement parameter for the atoms of the group. Isotropic displacement parameters were assumed also for the remaining atoms. The Rietveld refinement finally converged to Rwp=10.38% Rp=0.0751 (powder totals) and RF2= 6.12, 6.33 % (for the two used datasets).
The experimental data for mcguinnessite were acquired in the same conditions as for rosasite, and its crystal structure was successfully solved using the rosasite structure as a starting model. Trials to solve mcguinnessite through a malachite-structure model failed. The refined cell parameters for mcguinnessite were a=12.8978(6), b=9.3737(4), c=3.1558(2) Å, β=111.225(4)°, space group P21/a.
The Rietveld refinement (GSAS/EXPGUI package) finally converged to Rwp=8.06% Rp=0.0578 (powder totals) and RF2= 5.46, 5.16 % (for the two used datasets). The two minerals are isostructural, and the two independent metal sites are occupied in rosasite by Cu (the more distorted polyhedron) and by Zn0.8Cu0.2, in mcguinnessite by Cu0.82Mg0.18 and Mg0.9Cu0.1. The crystal structure of rosasite is reported in Fig. 1, as seen parallel to (001) plane.
Both the Zn and the Cu octahedra share edges forming Cu-based and Zn-based octahedral “columns”, running along [001] , and responsible for the acicular habit of the mineral.
These octahedral “columns” form by edge-sharing octahedral “ribbons”, two columns large, are directly connected by apex-sharing and through the carbonate groups, each carbonate being linked to three octahedral ribbons.
Figure 1: The crystal strucure of rosasite, as parallel to (001). In Mcguinnessite we find Mg instead of Zn, and the Cu site is partially filled by Mg.
References
Altomare, A., Burla, M.C., Cavalli, M., Carrozzini, B., Cascarano, G.L., Giacovazzo, C., Gagliardi, A., Molitemi, G. G., Polidori, G., & Rizzi, R. (1999): EXPO: a program for full powder pattern decomposition and crystal structure solution. – J. Appl. Cryst. (1999). 32, 339-340
Larson, A.C. and Von Dreele, R.B. (2000):General structure analysis system (GSAS) Los Alamos National Laboratory Report LAUR 86-748.
Roberts, A. C., Jambor, J. L., Grice, J.
D. (1986): The X-ray crystallography of rosasite from
Tsumeb, Namibia.
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1, 56-57.
Toby, B.H. (2001) : EXPGUI, a
graphical user interface for GSAS. J. Appl. Cryst 34, 210-221.
Zigan, F., Joswig, W., Schuster, H.D., Mason, S.A.
(1977)Verfeinerung der struktur von Malachit, Cu2(OH)2CO3,
durch neutronenbeugung : Zeitschrift für Kristallographie 145 (1977), 412-426.